C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear protein localization 4 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374747 NPLOC4-002 ENSG00000182446 9606 - 17:81561766-81637060 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverLungOvaryENST00000374747
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Lung Ovary
ENST00000374747 3.506±0.00 1.446±0.00 2.098±0.00 1.248±0.00 0.691±0.00 0.930±0.00 1.125±0.41 1.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BK CIL_0003BK_0001 CGP 17:81539885-81648465
CIL_0002HY CIL_0002HY_0001 CGP 17:81556887-81648749

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005783 ISS endoplasmic reticulum
GO:0007030 ISS Golgi organization
GO:0008270 IEA zinc ion binding
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0042175 ISS nuclear outer membrane-endoplasmic reticulum membrane network
GO:0061025 ISS membrane fusion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044271 Nploc4-001 protein_coding Mus_musculus 0 2278
ENSMUST00000103017 Nploc4-002 protein_coding Mus_musculus 0 1873
ENSMUST00000132519 Nploc4-003 processed_transcript Mus_musculus 0 693
ENSMUST00000136095 Nploc4-004 processed_transcript Mus_musculus 0 294
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000002 60

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