C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nipsnap homolog 3A (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374767 NIPSNAP3A-001 ENSG00000136783 9606 + 9:104747688-104760122 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374767 6.108±0.00 4.724±0.00 0.743±0.00 6.091±1.63 8.576±5.05 4.768±0.29 3.708±1.71 9.583±3.85 4.060±0.35 4.918±2.28 1.240±0.81 7.502±2.20 9.421±3.10 10.180±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035Q CIL_00035Q_0001 CGP 9:104694422-104760122

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015391 Nipsnap3b-001 protein_coding Mus_musculus 0 732
ENSMUST00000107665 Nipsnap3b-002 protein_coding Mus_musculus 0 409

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