C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: testis expressed 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374902 TEX10-002 ENSG00000136891 9606 - 9:100302084-100352939 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374902
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374902 1.973±0.00 3.119±0.00 2.309±0.44 2.217±0.00 2.604±0.29 1.308±0.80 2.945±0.00 0.551±0.25 1.051±0.42 3.963±0.00 6.175±1.20 10.869±3.53 18.792±1.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022A CIL_00022A_0002 CGP 9:100099256-100352939
CIL_000206 CIL_000206_0001 CGP 9:100302077-100451711

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0016021 IEA integral component of membrane
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030030 Tex10-003 protein_coding Mus_musculus 0 3613
ENSMUST00000164866 Tex10-201 protein_coding Mus_musculus 0 3465
ENSMUST00000155905 Tex10-001 nonsense_mediated_decay Mus_musculus 0 1635
ENSMUST00000155750 Tex10-002 processed_transcript Mus_musculus 0 545

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