C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin protein ligase E3 component n-recognin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375224 UBR4-004 ENSG00000127481 9606 - 1:19074514-19104916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375224
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375224 8.645±0.00 14.474±0.00 9.090±5.39 9.402±0.00 11.948±0.00 8.958±0.00 9.949±0.00 5.324±0.00 16.739±0.00 42.959±0.00 18.577±3.94 8.936±3.16 26.477±13.66

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165860 Ubr4-201 protein_coding Mus_musculus 0 3925
ENSMUST00000097822 Ubr4-001 protein_coding Mus_musculus 0 3925
ENSDART00000033970 ubr4-001 protein_coding Danio_rerio 0 1938
ENSDART00000156701 ubr4-202 protein_coding Danio_rerio 0 1834
ENSDART00000024846 ubr4-201 protein_coding Danio_rerio 0 1834
ENSMUST00000147999 Ubr4-004 protein_coding Mus_musculus 0 970
ENSMUST00000145273 Ubr4-008 retained_intron Mus_musculus 0 800
ENSMUST00000145659 Ubr4-009 processed_transcript Mus_musculus 0 625
ENSMUST00000135534 Ubr4-011 retained_intron Mus_musculus 0 508
ENSMUST00000141327 Ubr4-010 retained_intron Mus_musculus 0 488
ENSDART00000131914 ubr4-003 retained_intron Danio_rerio 0 193

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