C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 3B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375712 KIF3B-001 ENSG00000101350 9606 + 20:32277664-32335011 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375712
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375712 7.400±0.00 8.140±0.00 4.986±0.00 11.733±5.06 7.255±2.56 5.615±2.73 1.669±1.11 11.795±8.67 5.424±2.36 4.433±2.35 0.832±0.61 13.214±8.44 5.127±2.46 9.943±4.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RX CIL_0006RX_0002 CGP 20:32207880-32335011
CIL_0008A4 CIL_0008A4_0001 VISTA 20:32224531-32829311
CIL_0001KF CIL_0001KF_0001 CGP 20:32277664-32439319

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003777 IBA:IEA microtubule motor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005813 NAS centrosome
GO:0005819 IEA spindle
GO:0005829 TAS cytosol
GO:0005873 TAS plus-end kinesin complex
GO:0005876 NAS spindle microtubule
GO:0005929 IEA cilium
GO:0006200 IBA ATP catabolic process
GO:0007018 IBA:IEA microtubule-based movement
GO:0007052 TAS mitotic spindle organization
GO:0007100 TAS mitotic centrosome separation
GO:0007368 TAS determination of left/right symmetry
GO:0007596 TAS blood coagulation
GO:0008017 IEA microtubule binding
GO:0008089 TAS anterograde axon cargo transport
GO:0008152 IBA metabolic process
GO:0008574 TAS plus-end-directed microtubule motor activity
GO:0015630 IDA microtubule cytoskeleton
GO:0016020 IDA membrane
GO:0016887 IBA ATPase activity
GO:0016939 IDA kinesin II complex
GO:0017048 IPI Rho GTPase binding
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030496 IEA midbody
GO:0030705 IBA cytoskeleton-dependent intracellular transport
GO:0030990 IEA intraciliary transport particle
GO:0032467 IEA positive regulation of cytokinesis
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0072383 TAS plus-end-directed vesicle transport along microtubule
GO:0090307 IMP spindle assembly involved in mitosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028977 Kif3b-001 protein_coding Mus_musculus 0 3749
ENSDART00000122633 kif3b-202 protein_coding Danio_rerio 0 874
ENSDART00000102519 kif3b-201 protein_coding Danio_rerio 0 874
ENSDART00000148723 kif3b-001 protein_coding Danio_rerio 0 874

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