C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box S1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375978 FOXS1-001 ENSG00000179772 9606 - 20:31844301-31845619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375978
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375978 0.663±0.00 2.494±0.00 0.091±0.04 1.202±0.80 0.126±0.00 0.360±0.25 1.608±0.00 0.212±0.17 3.294±0.00 0.714±0.00 2.629±1.40 5.398±2.34 4.460±3.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0001 VISTA 20:31303913-31904751
CIL_00089Z CIL_00089Z_0001 VISTA 20:31373735-31977079
CIL_0008N4 CIL_0008N4_0001 VISTA 20:31410024-32010895
CIL_0000JB CIL_0000JB_0001 CGP 20:31819308-31845619
CIL_0001AA CIL_0001AA_0001 CGP 20:31844301-31870747

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 ISS blood vessel development
GO:0003677 ISS DNA binding
GO:0003700 TAS:IEA sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0040018 IEA positive regulation of multicellular organism growth
GO:0043433 ISS negative regulation of sequence-specific DNA binding transcription factor activity
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0050885 IEA neuromuscular process controlling balance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099200 Foxs1-001 protein_coding Mus_musculus 0 763
ENSMUST00000062292 Foxc1-001 protein_coding Mus_musculus 0 241
ENSMUST00000054691 Foxc2-001 protein_coding Mus_musculus 0 219
ENSMUST00000181609 Foxl1-001 protein_coding Mus_musculus 0 213
ENSMUST00000087285 Foxd3-001 protein_coding Mus_musculus 1e-33 148
ENSMUST00000058600 Foxd4-201 protein_coding Mus_musculus 6e-31 139

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