C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376236 APBB1IP-003 ENSG00000077420 9606 + 10:26438203-26567803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376236 11.311±0.00 13.474±0.00 0.299±0.00 2.515±1.37 17.428±15.58 2.237±0.84 0.855±0.68 3.198±0.07 9.205±8.71 4.477±1.35 0.375±0.22 2.316±1.08 6.161±0.47 1.205±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R5 CIL_0000R5_0001 CGP 10:26216307-26567803
CIL_0000R4 CIL_0000R4_0001 CGP 10:26438203-26746798

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007165 IEA signal transduction
GO:0007596 TAS blood coagulation
GO:0030054 IEA cell junction
GO:0030168 TAS platelet activation
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014290 Apbb1ip-001 protein_coding Mus_musculus 0 1546
ENSMUST00000148315 Apbb1ip-003 processed_transcript Mus_musculus 0 1118
ENSMUST00000131195 Apbb1ip-002 processed_transcript Mus_musculus 0 819
ENSMUST00000132993 Apbb1ip-004 retained_intron Mus_musculus 0 464

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