C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376511 PPP1R10-001 ENSG00000204569 9606 - 6:30600400-30617244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376511
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376511 7.194±0.00 11.610±0.00 3.615±0.00 5.259±2.18 5.411±2.59 3.369±0.66 3.114±2.71 5.079±1.69 4.297±0.92 2.500±1.42 6.791±0.00 9.745±6.17 8.841±1.06 15.332±1.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784
CIL_0001FO CIL_0001FO_0002 CGP 6:30600400-30626395

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0003677 IEA DNA binding
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006606 TAS protein import into nucleus
GO:0043086 IEA negative regulation of catalytic activity
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0072357 ISS PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087210 Ppp1r10-201 protein_coding Mus_musculus 0 3426
ENSMUST00000087211 Ppp1r10-001 protein_coding Mus_musculus 0 3424
ENSMUST00000151664 Ppp1r10-005 protein_coding Mus_musculus 0 900
ENSMUST00000133641 Ppp1r10-002 retained_intron Mus_musculus 0 739
ENSMUST00000154856 Ppp1r10-004 retained_intron Mus_musculus 0 702
ENSMUST00000173255 Gm8801-001 unprocessed_pseudogene Mus_musculus 0 335
ENSMUST00000130124 Ppp1r10-003 processed_transcript Mus_musculus 0 198

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