C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major histocompatibility complex, class I, G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376815 HLA-G-006 ENSG00000204632 9606 + 6:29827845-29831125 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000420 CIL_000420_0003 CGP 6:29722775-29831125
CIL_000420 CIL_000420_0002 CGP 6:29826967-29945884

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006955 IEA immune response
GO:0016020 IEA membrane
GO:0019882 IEA antigen processing and presentation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174250 H2-K2-001 unprocessed_pseudogene Mus_musculus 0 283
ENSMUST00000068291 H2-Q10-201 protein_coding Mus_musculus 0 261
ENSMUST00000174525 H2-Q10-001 protein_coding Mus_musculus 0 261
ENSMUST00000074806 H2-Q2-001 protein_coding Mus_musculus 0 246
ENSMUST00000172979 H2-Q5-001 polymorphic_pseudogene Mus_musculus 0 246
ENSMUST00000174854 H2-Q5-002 retained_intron Mus_musculus 0 246
ENSMUST00000076256 H2-Q7-201 protein_coding Mus_musculus 0 235
ENSMUST00000078205 H2-Q7-202 protein_coding Mus_musculus 0 235
ENSMUST00000116598 H2-Q7-203 protein_coding Mus_musculus 0 235
ENSMUST00000173788 H2-Q7-003 retained_intron Mus_musculus 0 235
ENSMUST00000071951 H2-Q7-001 protein_coding Mus_musculus 0 235
ENSMUST00000172785 H2-D1-001 protein_coding Mus_musculus 0 235
ENSMUST00000097335 Gm8909-201 protein_coding Mus_musculus 0 230
ENSMUST00000040467 Gm8909-001 protein_coding Mus_musculus 0 230
ENSMUST00000173353 Gm8909-002 protein_coding Mus_musculus 0 230
ENSMUST00000174589 H2-Q10-002 retained_intron Mus_musculus 0 228
ENSMUST00000174094 Gm10499-002 transcribed_unprocessed_pseudogene Mus_musculus 0 226
ENSMUST00000113879 H2-Q6-201 protein_coding Mus_musculus 0 224
ENSMUST00000174699 H2-Q6-001 protein_coding Mus_musculus 0 224
ENSMUST00000174471 H2-T23-005 retained_intron Mus_musculus 0 220
ENSMUST00000174839 H2-T23-002 retained_intron Mus_musculus 0 220
ENSMUST00000102678 H2-T23-001 protein_coding Mus_musculus 0 220
ENSMUST00000174161 H2-T23-003 retained_intron Mus_musculus 0 220
ENSMUST00000172538 C920025E04Rik-001 unprocessed_pseudogene Mus_musculus 0 219
ENSMUST00000073208 H2-Q1-001 protein_coding Mus_musculus 0 217
ENSMUST00000105041 H2-Q1-002 protein_coding Mus_musculus 0 217
ENSMUST00000172994 H2-Q1-003 retained_intron Mus_musculus 0 217
ENSMUST00000173975 H2-Q4-002 retained_intron Mus_musculus 0 206
ENSMUST00000081435 H2-Q4-001 protein_coding Mus_musculus 0 206
ENSMUST00000174778 Gm10499-001 retained_intron Mus_musculus 7.00649e-44 182

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