C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: castor zinc finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377022 CASZ1-003 ENSG00000130940 9606 - 1:10636604-10796648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377022
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377022 0.456±0.00 0.049±0.04 0.614±0.13 1.189±0.00 1.831±1.70 0.888±0.83 0.379±0.08 1.100±0.74 3.096±2.67 1.066±0.66 0.590±0.00 0.720±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IM CIL_0008IM_0001 VISTA 1:10233066-10834152
CIL_0007WE CIL_0007WE_0001 VISTA 1:10372013-10973061
CIL_00085P CIL_00085P_0001 VISTA 1:10397607-10998574
CIL_00082Y CIL_00082Y_0001 VISTA 1:10421182-11021687
CIL_0008S2 CIL_0008S2_0001 VISTA 1:10435049-11039184
CIL_00019R CIL_00019R_0002 CGP 1:10472288-10796650
CIL_0008RU CIL_0008RU_0001 VISTA 1:10491513-11092116
CIL_0007N5 CIL_0007N5_0001 UCNEbase 1:10513883-10905812
CIL_0008JG CIL_0008JG_0001 VISTA 1:10565145-11165671
CIL_0008JY CIL_0008JY_0001 VISTA 1:10605072-11206087
CIL_00019Q CIL_00019Q_0002 CGP 1:10636604-10982037

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122222 Casz1-004 protein_coding Mus_musculus 0 6252
ENSMUST00000094464 Casz1-001 protein_coding Mus_musculus 0 4385
ENSMUST00000139806 Casz1-006 protein_coding Mus_musculus 0 2314
ENSDART00000002812 casz1-201 protein_coding Danio_rerio 0 1110
ENSDART00000148257 casz1-001 protein_coding Danio_rerio 0 828
ENSMUST00000147270 Casz1-003 protein_coding Mus_musculus 0 682
ENSMUST00000128881 Casz1-005 processed_transcript Mus_musculus 0 195

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