C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 5B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377275 ARL5B-001 ENSG00000165997 9606 + 10:18659405-18681639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377275
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377275 3.407±0.00 1.601±0.00 1.877±0.26 1.383±0.29 2.038±0.25 1.184±0.54 2.394±0.06 2.553±0.27 2.382±0.73 0.641±0.33 4.478±2.25 2.338±0.29 1.820±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A5 CIL_0005A5_0001 CGP 10:18659405-19790401

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0019001 IEA guanyl nucleotide binding
GO:0031683 IEA G-protein beta/gamma-subunit complex binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069870 Arl5b-001 protein_coding Mus_musculus 0 1000
ENSMUST00000017562 Arl5b-002 protein_coding Mus_musculus 0 924
ENSMUST00000129509 Arl5b-004 nonsense_mediated_decay Mus_musculus 0 817
ENSMUST00000128682 Arl5b-003 nonsense_mediated_decay Mus_musculus 0 774

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