C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CSRP2 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377681 CSRP2BP-007 ENSG00000149474 9606 + 20:18142452-18188387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377681
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377681 1.122±0.00 1.763±0.35 0.741±0.00 1.332±0.00 2.943±0.00 2.541±0.00 0.557±0.20 1.502±0.00 1.614±0.56 3.409±1.31 3.790±0.78 3.986±1.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0001 VISTA 20:17559199-18160694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008080 IEA N-acetyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028911 Csrp2bp-002 protein_coding Mus_musculus 0 2693
ENSMUST00000147747 Csrp2bp-001 protein_coding Mus_musculus 0 2359
ENSMUST00000148500 Csrp2bp-003 retained_intron Mus_musculus 0 693
ENSMUST00000130654 Csrp2bp-006 processed_transcript Mus_musculus 0 531
ENSMUST00000137611 Csrp2bp-010 processed_transcript Mus_musculus 0 368
ENSMUST00000156410 Csrp2bp-004 nonsense_mediated_decay Mus_musculus 0 322
ENSMUST00000125398 Csrp2bp-007 protein_coding Mus_musculus 0 292
ENSMUST00000143318 Csrp2bp-009 retained_intron Mus_musculus 0 292

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