C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377685 ATP2A2-002 ENSG00000174437 9606 + 12:110281297-110351057 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyOvaryENST00000377685
Transcript ID Bladder Breast Kidney Ovary
ENST00000377685 1.304±0.00 3.331±0.00 2.873±0.00 3.235±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QG CIL_0001QG_0002 CGP 12:110124335-110351093
CIL_0001QF CIL_0001QF_0002 CGP 12:110280756-110403730

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031423 Atp2a2-201 protein_coding Mus_musculus 0 5193
ENSMUST00000177974 Atp2a2-202 protein_coding Mus_musculus 0 3988
ENSMUST00000179939 Atp2a2-203 protein_coding Mus_musculus 0 3988
ENSDART00000047201 atp2a2b-001 protein_coding Danio_rerio 0 1827

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