C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H2bi
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377733 HIST1H2BI-001 ENSG00000278588 9606 + 6:26272976-26273356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000377733
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000377733 1.316±0.00 1.160±0.00 1.519±0.00 25.788±0.00 47.158±0.00 1.279±0.00 4.156±0.00 6.064±0.00 9.059±8.27 8.158±0.00 0.123±0.00 0.661±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 NAS:IEA nucleosome
GO:0002227 IDA innate immune response in mucosa
GO:0003677 NAS:IEA DNA binding
GO:0005615 IDA extracellular space
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 NAS nucleosome assembly
GO:0019731 IDA antibacterial humoral response
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0050830 IDA defense response to Gram-positive bacterium
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110476 Hist1h2bm-001 protein_coding Mus_musculus 0 551
ENSMUST00000051091 Hist1h2be-001 protein_coding Mus_musculus 0 540
ENSMUST00000091704 Hist1h2be-002 protein_coding Mus_musculus 0 540
ENSMUST00000018246 Hist1h2bc-001 protein_coding Mus_musculus 0 540
ENSMUST00000091756 Hist1h2bl-001 protein_coding Mus_musculus 0 534
ENSMUST00000105106 Hist1h2bf-001 protein_coding Mus_musculus 0 534
ENSMUST00000091709 Hist1h2bn-001 protein_coding Mus_musculus 0 529
ENSMUST00000110467 Hist1h2br-001 protein_coding Mus_musculus 0 529
ENSMUST00000110469 Hist1h2bq-001 protein_coding Mus_musculus 0 529
ENSMUST00000180288 Hist1h2br-201 protein_coding Mus_musculus 0 525
ENSMUST00000091749 Hist1h2bq-201 protein_coding Mus_musculus 0 525
ENSMUST00000102982 Hist1h2bp-001 protein_coding Mus_musculus 0 523
ENSMUST00000110473 Hist1h2bp-002 protein_coding Mus_musculus 0 520
ENSMUST00000079251 Hist1h2bg-001 protein_coding Mus_musculus 0 518
ENSMUST00000078156 Hist1h2bh-001 protein_coding Mus_musculus 0 518
ENSMUST00000110452 Hist1h2bj-001 protein_coding Mus_musculus 0 518
ENSMUST00000110455 Hist1h2bk-001 protein_coding Mus_musculus 0 510
ENSMUST00000099703 Hist1h2bb-001 protein_coding Mus_musculus 0 473
ENSMUST00000117835 Gm12957-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000177113 Hist2h2bb-001 protein_coding Mus_musculus 0 446
ENSMUST00000090781 Hist2h2be-001 protein_coding Mus_musculus 0 409
ENSMUST00000051089 Hist2h2bb-201 protein_coding Mus_musculus 0 254

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