C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377951 PPIAP26-001 ENSG00000150276 9606 + 13:52820497-52821018 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyMuscleTestisENST00000377951
Transcript ID Adipose Adrenal Brain Breast Kidney Muscle Testis
ENST00000377951 0.054±0.00 0.028±0.00 0.059±0.00 0.142±0.00 0.084±0.00 0.048±0.00 0.116±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ME CIL_0000ME_0001 CGP 13:52703264-52848641

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 468
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 449
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 446
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 440
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 425
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 422
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 399
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 361
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 268
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 254
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 226
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 1e-28 130

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