C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378459 TRPC7-005 ENSG00000069018 9606 - 5:136213435-136365254 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000378459
Transcript ID Brain
ENST00000378459 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P3 CIL_0005P3_0001 CGP 5:136132845-136365537
CIL_0005P0 CIL_0005P0_0001 CGP 5:136213320-137598379

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173817 Trpc7-006 protein_coding Mus_musculus 0 3131
ENSMUST00000022023 Trpc7-001 protein_coding Mus_musculus 0 2061
ENSMUST00000109871 Trpc7-002 protein_coding Mus_musculus 0 2047
ENSMUST00000173466 Trpc7-009 nonsense_mediated_decay Mus_musculus 0 1988
ENSMUST00000173513 Trpc7-008 protein_coding Mus_musculus 0 1768
ENSMUST00000174457 Trpc7-004 protein_coding Mus_musculus 0 1768
ENSMUST00000151918 Trpc7-003 nonsense_mediated_decay Mus_musculus 0 1764
ENSMUST00000173067 Trpc7-005 nonsense_mediated_decay Mus_musculus 0 1498
ENSMUST00000146475 Trpc3-002 processed_transcript Mus_musculus 0 551
ENSMUST00000029271 Trpc3-001 protein_coding Mus_musculus 0 551

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