C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retention in endoplasmic reticulum sorting receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378513 RER1-201 ENSG00000157916 9606 + 1:2391775-2405442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleENST00000378513
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle
ENST00000378513 3.411±0.00 1.505±0.00 0.847±0.00 3.963±0.00 1.798±0.00 0.690±0.00 0.678±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0001 VISTA 1:1910870-2513425

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030914 Rer1-001 protein_coding Mus_musculus 0 1123
ENSMUST00000149796 Rer1-002 processed_transcript Mus_musculus 0 963
ENSMUST00000125357 Rer1-003 processed_transcript Mus_musculus 3e-18 99

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