C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378700 ID4-001 ENSG00000172201 9606 + 6:19837386-19840684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378700
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378700 18.570±0.00 8.138±0.00 0.804±0.00 4.898±0.63 11.631±9.37 3.216±1.52 0.827±0.61 4.228±4.12 3.227±2.99 11.397±0.00 1.067±0.00 9.828±7.39 12.289±7.90 21.249±3.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041X CIL_00041X_0001 CGP 6:18387350-19840684
CIL_0007JM CIL_0007JM_0001 UCNEbase 6:18536583-20034717
CIL_000910 CIL_000910_0001 VISTA 6:19418991-20022679
CIL_0009DD CIL_0009DD_0001 VISTA 6:19675926-20277282

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IEA G1/S transition of mitotic cell cycle
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001085 IEA RNA polymerase II transcription factor binding
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IC nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007405 IEA neuroblast proliferation
GO:0007420 IEA brain development
GO:0007623 IEA circadian rhythm
GO:0008283 IEA cell proliferation
GO:0008284 IEA positive regulation of cell proliferation
GO:0021766 IEA hippocampus development
GO:0021895 IEA cerebral cortex neuron differentiation
GO:0022010 IEA central nervous system myelination
GO:0034613 IEA cellular protein localization
GO:0045444 IEA fat cell differentiation
GO:0045599 IEA negative regulation of fat cell differentiation
GO:0045665 IEA negative regulation of neuron differentiation
GO:0045669 IEA positive regulation of osteoblast differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0048712 IEA negative regulation of astrocyte differentiation
GO:0048715 IEA negative regulation of oligodendrocyte differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021810 Id4-201 protein_coding Mus_musculus 0 1469

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