C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 3C (BRIGHT-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378909 ARID3C-002 ENSG00000205143 9606 - 9:34621379-34628107 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartOvaryPlacentaTestisENST00000378909
Transcript ID Adipose Brain Breast Heart Ovary Placenta Testis
ENST00000378909 0.040±0.00 0.073±0.04 0.038±0.00 0.021±0.00 0.028±0.00 0.051±0.01 0.557±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GW CIL_0003GW_0001 CGP 9:34613545-34628107
CIL_0005SN CIL_0005SN_0001 CGP 9:34621379-34637809

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0045121 IDA membrane raft
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084698 Arid3c-001 protein_coding Mus_musculus 0 1327
ENSMUST00000171251 Arid3c-201 protein_coding Mus_musculus 0 1293
ENSMUST00000150809 Arid3c-002 protein_coding Mus_musculus 0 1046
ENSMUST00000105376 Arid3a-003 protein_coding Mus_musculus 0 279
ENSMUST00000105377 Arid3a-002 protein_coding Mus_musculus 0 279
ENSMUST00000019708 Arid3a-001 protein_coding Mus_musculus 0 279
ENSMUST00000135005 Arid3a-004 processed_transcript Mus_musculus 0 261

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