C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: atlastin GTPase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378954 ATL2-002 ENSG00000119787 9606 - 2:38294880-38377262 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378954 3.565±0.00 3.547±0.00 4.094±0.00 3.481±1.33 7.583±2.06 8.419±3.42 3.653±1.55 6.573±1.84 8.606±3.80 4.495±2.04 5.725±0.50 12.717±5.51 3.903±0.30 9.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002IO CIL_0002IO_0001 CGP 2:38066973-38377285
CIL_0002IR CIL_0002IR_0001 CGP 2:38294880-38603586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 NAS:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005783 IDA endoplasmic reticulum
GO:0006184 IEA GTP catabolic process
GO:0007029 IMP endoplasmic reticulum organization
GO:0007030 IMP Golgi organization
GO:0016020 IDA membrane
GO:0016021 IDA integral component of membrane
GO:0042802 IDA identical protein binding
GO:0051260 IDA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068282 Atl2-201 protein_coding Mus_musculus 0 3821
ENSMUST00000112437 Atl2-202 protein_coding Mus_musculus 0 3312

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