C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379052 RBM24-001 ENSG00000112183 9606 + 6:17281346-17293875 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379052
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379052 0.474±0.00 0.472±0.00 1.338±0.00 1.005±0.91 7.797±3.47 0.440±0.00 0.024±0.00 0.319±0.00 12.168±0.00 0.705±0.19 0.225±0.00 2.779±1.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RR CIL_0003RR_0001 CGP 6:17102258-17293875
CIL_0009C9 CIL_0009C9_0001 VISTA 6:17172901-17774881
CIL_0008JF CIL_0008JF_0001 VISTA 6:17172919-17774874
CIL_0008B7 CIL_0008B7_0001 VISTA 6:17234961-17839440
CIL_0003RO CIL_0003RO_0001 CGP 6:17281346-17557792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0010830 ISS regulation of myotube differentiation
GO:0030154 IEA cell differentiation
GO:0043488 ISS regulation of mRNA stability

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037923 Rbm24-201 protein_coding Mus_musculus 0 1387

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