C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), alpha 1, catalytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379068 POLA1-005 ENSG00000101868 9606 + X:24693919-24996986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000379068
Transcript ID Adrenal Bladder Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000379068 0.692±0.00 0.447±0.00 0.159±0.00 1.002±0.25 0.811±0.63 0.786±0.00 1.386±0.21 1.284±0.00 2.760±1.26 1.884±0.22 1.603±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084H CIL_00084H_0001 VISTA X:24441239-25041771
CIL_0008NE CIL_0008NE_0001 VISTA X:24504486-25106506
CIL_0008NF CIL_0008NF_0001 VISTA X:24546114-25147616
CIL_0008NL CIL_0008NL_0001 VISTA X:24576218-25177967
CIL_0008NM CIL_0008NM_0001 VISTA X:24597265-25200155
CIL_0008W8 CIL_0008W8_0001 VISTA X:24627531-25229450
CIL_0008W7 CIL_0008W7_0001 VISTA X:24689762-25291464
CIL_0001X9 CIL_0001X9_0002 CGP X:24693919-25015948

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001882 IEA nucleoside binding
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006260 IEA DNA replication
GO:0006270 IEA DNA replication initiation
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006856 Pola1-001 protein_coding Mus_musculus 0 5478
ENSMUST00000142479 Pola1-004 processed_transcript Mus_musculus 0 484

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