C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELAV like neuron-specific RNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380117 ELAVL2-001 ENSG00000107105 9606 - 9:23691811-23826337 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000380117
Transcript ID Muscle
ENST00000380117 0.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VP CIL_0007VP_0001 VISTA 9:23196287-23797396
CIL_00074G CIL_00074G_0001 CGP 9:23690104-24545946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003730 TAS mRNA 3'-UTR binding
GO:0005515 IPI protein binding
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107124 Elavl2-201 protein_coding Mus_musculus 0 3290
ENSMUST00000107109 Elavl2-004 protein_coding Mus_musculus 0 2588
ENSMUST00000102799 Elavl2-001 protein_coding Mus_musculus 0 2409
ENSMUST00000107120 Elavl2-003 protein_coding Mus_musculus 0 2409
ENSMUST00000008633 Elavl2-002 protein_coding Mus_musculus 0 2401
ENSMUST00000107111 Elavl2-005 protein_coding Mus_musculus 0 2004
ENSMUST00000176469 Elavl2-014 retained_intron Mus_musculus 0 1772
ENSMUST00000107116 Elavl2-007 protein_coding Mus_musculus 0 1740
ENSMUST00000107118 Elavl2-011 protein_coding Mus_musculus 0 1186
ENSMUST00000107110 Elavl2-008 protein_coding Mus_musculus 0 1186
ENSMUST00000128599 Elavl2-012 retained_intron Mus_musculus 0 878
ENSMUST00000106601 Elavl4-007 protein_coding Mus_musculus 0 680
ENSMUST00000106600 Elavl4-006 protein_coding Mus_musculus 0 680
ENSMUST00000102722 Elavl4-005 protein_coding Mus_musculus 0 680
ENSMUST00000106598 Elavl4-003 protein_coding Mus_musculus 0 680
ENSMUST00000177109 Elavl2-013 protein_coding Mus_musculus 0 623
ENSMUST00000106597 Elavl4-004 protein_coding Mus_musculus 0 449
ENSMUST00000102723 Elavl4-002 protein_coding Mus_musculus 0 449
ENSMUST00000106603 Elavl4-001 protein_coding Mus_musculus 0 422
ENSMUST00000147611 Elavl2-010 protein_coding Mus_musculus 0 283
ENSMUST00000138972 Elavl4-012 protein_coding Mus_musculus 0 250
ENSMUST00000144554 Elavl4-010 processed_transcript Mus_musculus 0 217
ENSMUST00000153906 Elavl4-011 protein_coding Mus_musculus 1e-35 156
ENSMUST00000176362 Elavl2-015 protein_coding Mus_musculus 9e-32 143
ENSMUST00000142722 Elavl4-008 protein_coding Mus_musculus 3e-21 108

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