C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylthioadenosine phosphorylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380172 MTAP-001 ENSG00000099810 9606 + 9:21802543-21867078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380172
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380172 1.530±0.00 0.865±0.00 0.809±0.00 1.190±0.00 1.046±0.48 1.239±0.06 0.421±0.05 1.268±0.32 1.646±0.61 0.461±0.00 0.275±0.00 2.280±0.15 1.480±0.07 0.953±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074E CIL_00074E_0001 CGP 9:21480839-21937651
CIL_0007YE CIL_0007YE_0001 VISTA 9:21773412-22380489
CIL_0007U7 CIL_0007U7_0001 VISTA 9:21778886-22382106
CIL_0007YH CIL_0007YH_0001 VISTA 9:21779916-22382548
CIL_0007YG CIL_0007YG_0001 VISTA 9:21783894-22389830
CIL_0007U8 CIL_0007U8_0001 VISTA 9:21787553-22389799
CIL_00095D CIL_00095D_0001 VISTA 9:21788649-22389830
CIL_000945 CIL_000945_0001 VISTA 9:21789705-22397955
CIL_0008WE CIL_0008WE_0001 VISTA 9:21797850-22401302
CIL_0007YC CIL_0007YC_0001 VISTA 9:21801286-22408086

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000096 TAS sulfur amino acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004645 IEA phosphorylase activity
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006166 IEA purine ribonucleoside salvage
GO:0006595 TAS polyamine metabolic process
GO:0009116 IEA nucleoside metabolic process
GO:0017061 TAS:IEA S-methyl-5-thioadenosine phosphorylase activity
GO:0019509 IEA L-methionine biosynthetic process from methylthioadenosine
GO:0032259 IEA methylation
GO:0033574 IEA response to testosterone
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058030 Mtap-001 protein_coding Mus_musculus 0 1038
ENSMUST00000119757 Gm4914-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000002 60

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