C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon, beta 1, fibroblast
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380232 IFNB1-002 ENSG00000171855 9606 - 9:21077105-21077963 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENST00000380232
Transcript ID Brain Ovary Testis
ENST00000380232 0.050±0.00 0.179±0.00 0.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074B CIL_00074B_0001 CGP 9:20999515-21077963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002250 IEA adaptive immune response
GO:0002286 IBA T cell activation involved in immune response
GO:0002312 IMP B cell activation involved in immune response
GO:0002323 IBA natural killer cell activation involved in immune response
GO:0005125 IBA cytokine activity
GO:0005126 IEA cytokine receptor binding
GO:0005132 NAS type I interferon receptor binding
GO:0005576 IC:IEA extracellular region
GO:0005615 IBA extracellular space
GO:0006952 IEA defense response
GO:0006959 IBA humoral immune response
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007596 TAS blood coagulation
GO:0009615 NAS response to virus
GO:0019221 IBA cytokine-mediated signaling pathway
GO:0030101 NAS natural killer cell activation
GO:0030183 IBA B cell differentiation
GO:0033141 IDA positive regulation of peptidyl-serine phosphorylation of STAT protein
GO:0035458 IDA cellular response to interferon-beta
GO:0042100 NAS B cell proliferation
GO:0042742 IEA defense response to bacterium
GO:0043330 IDA response to exogenous dsRNA
GO:0045071 IDA negative regulation of viral genome replication
GO:0045087 TAS innate immune response
GO:0045089 NAS positive regulation of innate immune response
GO:0045343 NAS regulation of MHC class I biosynthetic process
GO:0045581 IDA negative regulation of T cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051607 TAS defense response to virus
GO:0060337 IDA type I interferon signaling pathway
GO:0060338 TAS regulation of type I interferon-mediated signaling pathway
GO:0071359 IEA cellular response to dsRNA
GO:0071360 TAS cellular response to exogenous dsRNA
GO:2000552 IDA negative regulation of T-helper 2 cell cytokine production
GO:2001235 IDA positive regulation of apoptotic signaling pathway

Homologs

No Homologs available.

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