C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesenteric estrogen-dependent adipogenesis
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380482 MEDAG-001 ENSG00000102802 9606 + 13:30906191-30925572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380482
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380482 37.998±0.00 10.455±0.00 0.765±0.00 7.346±4.62 6.090±0.00 2.196±1.97 1.413±1.39 2.123±1.70 5.314±4.65 1.574±0.37 4.505±5.29 3.987±1.51 6.788±4.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0001 VISTA 13:30490781-31093754
CIL_0002AA CIL_0002AA_0001 CGP 13:30713478-30925572
CIL_0005FT CIL_0005FT_0001 CGP 13:30906191-30975502

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0045600 ISS positive regulation of fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093110 Medag-001 protein_coding Mus_musculus 0 1013
ENSMUST00000121876 Medag-003 protein_coding Mus_musculus 0 708
ENSMUST00000146189 Medag-002 retained_intron Mus_musculus 0 446

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