C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of calcineurin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381135 RCAN1-201 ENSG00000159200 9606 - 21:34516445-34525467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryENST00000381135
Transcript ID Lung Ovary
ENST00000381135 13.172±0.00 2.179±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ON CIL_0008ON_0001 VISTA 21:34142879-34745057
CIL_0007SX CIL_0007SX_0001 VISTA 21:34145397-34749042
CIL_0008OM CIL_0008OM_0001 VISTA 21:34146393-34747421
CIL_0008ZS CIL_0008ZS_0001 VISTA 21:34243666-34847364
CIL_00094R CIL_00094R_0001 VISTA 21:34258399-34859715
CIL_00078G CIL_00078G_0001 CGP 21:34446688-34615142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002931 IEA response to ischemia
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006979 IEA response to oxidative stress
GO:0007519 IEA skeletal muscle tissue development
GO:0007614 IEA short-term memory
GO:0009612 IEA response to mechanical stimulus
GO:0019722 IEA calcium-mediated signaling
GO:0031987 IEA locomotion involved in locomotory behavior
GO:0033173 IEA calcineurin-NFAT signaling cascade
GO:0043627 IEA response to estrogen
GO:0043666 IEA regulation of phosphoprotein phosphatase activity
GO:0048741 IEA skeletal muscle fiber development
GO:0051151 IEA negative regulation of smooth muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023672 Rcan1-201 protein_coding Mus_musculus 0 776
ENSMUST00000060005 Rcan1-202 protein_coding Mus_musculus 0 774

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