C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 165
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381334 TMEM165-001 ENSG00000134851 9606 + 4:55395957-55426172 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381334
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381334 19.338±0.00 23.478±0.00 18.211±0.00 15.831±2.29 11.143±1.95 9.159±5.28 34.765±0.00 6.063±0.00 16.923±9.25 2.989±0.00 17.003±5.84 25.831±12.12 16.872±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025I CIL_00025I_0001 CGP 4:55346109-55453397
CIL_00025L CIL_00025L_0001 CGP 4:55395957-55547138

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005765 IDA lysosomal membrane
GO:0005794 IDA Golgi apparatus
GO:0006487 IMP protein N-linked glycosylation
GO:0006874 IGI cellular calcium ion homeostasis
GO:0010008 IDA endosome membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0032472 IDA Golgi calcium ion transport
GO:0032588 IDA trans-Golgi network membrane
GO:0035751 IMP regulation of lysosomal lumen pH
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031144 Tmem165-001 protein_coding Mus_musculus 0 1273
ENSMUST00000138544 Tmem165-005 retained_intron Mus_musculus 0 564
ENSMUST00000130842 Tmem165-004 protein_coding Mus_musculus 0 468
ENSMUST00000153633 Tmem165-006 processed_transcript Mus_musculus 0 436

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