C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381815 GART-003 ENSG00000159131 9606 - 21:33503931-33542138 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryPlacentaENST00000381815
Transcript ID Liver Muscle Ovary Placenta
ENST00000381815 11.217±0.00 14.880±0.00 25.979±7.36 16.531±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EH CIL_0007EH_0001 CGP 21:33485530-33543491
CIL_000466 CIL_000466_0001 CGP 21:33503931-33577481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004637 IEA phosphoribosylamine-glycine ligase activity
GO:0004641 IEA phosphoribosylformylglycinamidine cyclo-ligase activity
GO:0004644 IEA phosphoribosylglycinamide formyltransferase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006144 TAS purine nucleobase metabolic process
GO:0006189 IEA 'de novo' IMP biosynthetic process
GO:0008168 IEA methyltransferase activity
GO:0009058 IEA biosynthetic process
GO:0009113 IEA purine nucleobase biosynthetic process
GO:0009168 TAS purine ribonucleoside monophosphate biosynthetic process
GO:0016742 IEA hydroxymethyl-, formyl- and related transferase activity
GO:0032259 IEA methylation
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023684 Gart-001 protein_coding Mus_musculus 0 2819
ENSMUST00000156713 Gart-003 nonsense_mediated_decay Mus_musculus 0 2800
ENSMUST00000120450 Gart-002 protein_coding Mus_musculus 0 1201

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