C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oligodendrocyte transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382348 OLIG1-001 ENSG00000184221 9606 + 21:33070144-33072420 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLungMuscleOvaryPlacentaTestisENST00000382348
Transcript ID Bladder Brain Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000382348 0.386±0.00 31.627±27.45 0.114±0.00 1.563±0.00 0.032±0.00 0.120±0.00 0.030±0.01 0.132±0.00 1.100±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TI CIL_0008TI_0001 VISTA 21:32549146-33151638
CIL_00087M CIL_00087M_0001 VISTA 21:32616647-33220574
CIL_0009BQ CIL_0009BQ_0001 VISTA 21:32618474-33219807
CIL_0007UY CIL_0007UY_0001 VISTA 21:32793653-33396760
CIL_0001C5 CIL_0001C5_0001 CGP 21:33025845-33072420
CIL_0007LZ CIL_0007LZ_0005 UCNEbase 21:33054003-33096093
CIL_0007HU CIL_0007HU_0001 CGP 21:33070144-33265675

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity
GO:0048663 IEA neuron fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056882 Olig1-001 protein_coding Mus_musculus 0 846

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