C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: one cut homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382349 ONECUT3-001 ENSG00000205922 9606 + 19:1752373-1780988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000382349
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000382349 0.077±0.00 0.122±0.00 0.085±0.00 0.082±0.00 0.060±0.00 0.019±0.01 0.047±0.00 0.027±0.00 0.081±0.00 0.024±0.00 0.026±0.01 0.757±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000188 CIL_000188_0001 CGP 19:1609290-1780988
CIL_0005ZE CIL_0005ZE_0002 CGP 19:1752373-1812276

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001228 IEA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0031018 TAS endocrine pancreas development
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051773 Onecut3-001 protein_coding Mus_musculus 0 1550
ENSDART00000127348 ONECUT2-201 protein_coding Danio_rerio 0 392
ENSDART00000151049 ONECUT2-001 protein_coding Danio_rerio 0 392
ENSMUST00000115145 Onecut2-201 protein_coding Mus_musculus 0 366
ENSMUST00000175965 Onecut2-001 protein_coding Mus_musculus 0 366
ENSMUST00000074912 2010012O05Rik-201 protein_coding Mus_musculus 0.000003 60

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