C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tyrosinase-related protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000388918 TYRP1-001 ENSG00000107165 9606 + 9:12693435-12710290 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLungOvaryPlacentaTestisENST00000388918
Transcript ID Adipose Bladder Brain Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000388918 0.010±0.00 1.077±0.00 0.620±0.19 0.282±0.27 3.388±2.25 0.549±0.00 0.259±0.00 0.070±0.04 0.019±0.00 0.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UW CIL_0005UW_0002 CGP 9:8314246-12710290
CIL_00012W CIL_00012W_0001 CGP 9:12685439-12822131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005507 IEA copper ion binding
GO:0005515 IPI protein binding
GO:0006582 IEA melanin metabolic process
GO:0008152 IEA metabolic process
GO:0010008 IDA endosome membrane
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0016716 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen
GO:0030318 IEA melanocyte differentiation
GO:0030669 IDA clathrin-coated endocytic vesicle membrane
GO:0032438 IEA melanosome organization
GO:0033162 IEA:ISS melanosome membrane
GO:0042438 IEA melanin biosynthetic process
GO:0042470 ISS melanosome
GO:0042803 ISS protein homodimerization activity
GO:0043438 IEA acetoacetic acid metabolic process
GO:0043473 IEA pigmentation
GO:0046982 ISS protein heterodimerization activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006151 Tyrp1-201 protein_coding Mus_musculus 0 1727
ENSMUST00000102831 Tyrp1-001 protein_coding Mus_musculus 0 1727
ENSMUST00000133655 Tyrp1-003 protein_coding Mus_musculus 0 686
ENSMUST00000133932 Tyrp1-002 protein_coding Mus_musculus 0 383

Loading