C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box I2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000388920 FOXI2-001 ENSG00000186766 9606 + 10:127737235-127741186 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryTestisENST00000388920
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000388920 0.117±0.00 0.280±0.00 0.367±0.00 0.111±0.00 0.039±0.00 0.046±0.00 0.460±0.00 0.013±0.00 0.130±0.00 0.069±0.02 0.085±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LM CIL_0001LM_0001 CGP 10:127737235-127892947

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060356 Foxi2-201 protein_coding Mus_musculus 0 579
ENSMUST00000069634 Foxi3-201 protein_coding Mus_musculus 0 342
ENSMUST00000163089 Foxi3-001 protein_coding Mus_musculus 0 342
ENSMUST00000060271 Foxi1-001 protein_coding Mus_musculus 0 294
ENSMUST00000087285 Foxd3-001 protein_coding Mus_musculus 9e-28 130
ENSMUST00000179669 Foxg1-201 protein_coding Mus_musculus 1e-21 110
ENSMUST00000021333 Foxg1-001 protein_coding Mus_musculus 1e-21 110
ENSMUST00000156952 Foxg1-004 retained_intron Mus_musculus 1e-21 110
ENSMUST00000058600 Foxd4-201 protein_coding Mus_musculus 6e-20 104
ENSMUST00000179205 Gm5294-201 protein_coding Mus_musculus 4e-16 92

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