C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear VCP-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000391875 NVL-002 ENSG00000143748 9606 - 1:224227334-224330170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000391875
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000391875 1.742±0.00 3.341±0.00 0.555±0.08 3.506±0.00 1.342±0.00 0.420±0.28 1.974±0.00 0.494±0.02 0.401±0.00 3.130±1.35 2.763±0.56 2.116±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BX CIL_0000BX_0002 CGP 1:224175756-224330387
CIL_0008IP CIL_0008IP_0001 VISTA 1:224201914-224806293
CIL_0005S3 CIL_0005S3_0001 CGP 1:224227334-224379459

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0009378 IEA four-way junction helicase activity
GO:0016020 IDA membrane
GO:0016301 IEA kinase activity
GO:0016887 IEA ATPase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027797 Nvl-201 protein_coding Mus_musculus 0 2752

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