C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial transcription termination factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000391980 MTERF4-001 ENSG00000122085 9606 - 2:241095566-241102332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENST00000391980
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENST00000391980 7.024±0.00 7.085±0.00 1.387±0.00 2.695±0.74 8.803±0.00 2.813±1.77 3.142±1.36 2.113±0.20 8.845±0.00 11.826±0.00 4.016±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UE CIL_0004UE_0002 CGP 2:240906330-241095568
CIL_0004GT CIL_0004GT_0001 CGP 2:240998838-241102332
CIL_000474 CIL_000474_0001 CGP 2:241072169-241150264

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003690 IEA double-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA:IEA mitochondrion
GO:0005762 IDA mitochondrial large ribosomal subunit
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006364 IEA rRNA processing
GO:0019843 IDA rRNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027492 Mterfd2-001 protein_coding Mus_musculus 0 601
ENSMUST00000136754 Mterfd2-005 processed_transcript Mus_musculus 1.99965e-42 178

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