C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ZFP82 zinc finger protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392161 ZFP82-001 ENSG00000181007 9606 - 19:36391960-36418656 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392161 0.370±0.00 1.302±0.00 0.041±0.00 0.669±0.19 0.691±0.26 0.519±0.31 0.538±0.02 0.377±0.29 0.355±0.30 0.452±0.23 0.168±0.00 1.194±0.71 0.843±0.18 1.372±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000763 CIL_000763_0001 CGP 19:36334453-36418656
CIL_0006DS CIL_0006DS_0001 CGP 19:36383120-36489902

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182746 Gm26920-001 nonsense_mediated_decay Mus_musculus 0 1487
ENSMUST00000080834 Zfp82-001 protein_coding Mus_musculus 0 1487
ENSMUST00000183025 Zfp82-007 retained_intron Mus_musculus 0 1260
ENSMUST00000182546 Zfp82-006 protein_coding Mus_musculus 0 1258
ENSMUST00000182483 Zfp82-003 retained_intron Mus_musculus 0 1254
ENSMUST00000077787 Zfp14-201 protein_coding Mus_musculus 0 453
ENSMUST00000182919 Zfp82-005 protein_coding Mus_musculus 0 206
ENSMUST00000088785 Zfp566-001 protein_coding Mus_musculus 5e-35 154
ENSMUST00000183115 Zfp82-004 protein_coding Mus_musculus 6e-29 134
ENSMUST00000088787 Zfp948-201 protein_coding Mus_musculus 0.00000000001 77

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