C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: t-complex 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392168 TCP1-004 ENSG00000120438 9606 - 6:159778987-159789703 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000392168
Transcript ID Ovary Placenta Testis
ENST00000392168 71.059±0.00 33.406±2.80 79.241±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0001 VISTA 6:159654795-160257694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0044267 IEA cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089024 Tcp1-003 protein_coding Mus_musculus 0 2124
ENSMUST00000151287 Tcp1-001 protein_coding Mus_musculus 0 2039
ENSMUST00000129632 Tcp1-002 retained_intron Mus_musculus 0 1714
ENSMUST00000120941 Tcp1-ps1-001 processed_pseudogene Mus_musculus 0 1201
ENSMUST00000138709 Tcp1-010 retained_intron Mus_musculus 0 815
ENSDART00000126038 tcp1-201 protein_coding Danio_rerio 0 680
ENSMUST00000133003 Tcp1-007 retained_intron Mus_musculus 0 470
ENSMUST00000151715 Tcp1-006 retained_intron Mus_musculus 0 329
ENSMUST00000043923 Acat3-001 protein_coding Mus_musculus 0 298
ENSMUST00000143961 Tcp1-004 protein_coding Mus_musculus 0 209
ENSMUST00000147724 Tcp1-005 processed_transcript Mus_musculus 4e-24 117
ENSMUST00000137289 Tcp1-009 retained_intron Mus_musculus 0 407

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