C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 beta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392221 EEF1B2-201 ENSG00000114942 9606 + 2:206159594-206162927 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392221 94.114±0.00 145.340±0.00 33.368±0.00 79.972±18.04 73.099±0.14 153.265±50.43 82.920±4.98 109.612±17.57 102.018±30.66 104.663±8.55 120.521±7.68 30.163±0.00 107.477±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039O CIL_00039O_0001 CGP 2:205993721-206159603
CIL_0001R4 CIL_0001R4_0001 CGP 2:206114817-206162928
CIL_0001R5 CIL_0001R5_0001 CGP 2:206159585-206218047

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003746 IEA:NAS translation elongation factor activity
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005853 IEA:NAS eukaryotic translation elongation factor 1 complex
GO:0006412 TAS translation
GO:0006414 IEA:NAS translational elongation
GO:0010467 TAS gene expression
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129339 Eef1b2-001 protein_coding Mus_musculus 0 881
ENSMUST00000135877 Eef1b2-004 nonsense_mediated_decay Mus_musculus 0 665
ENSMUST00000027108 Eef1b2-006 nonsense_mediated_decay Mus_musculus 0 652
ENSMUST00000188524 Eef1b2-009 protein_coding Mus_musculus 0 592
ENSMUST00000142062 Eef1b2-002 nonsense_mediated_decay Mus_musculus 0 374
ENSMUST00000174890 Eef1b2-008 nonsense_mediated_decay Mus_musculus 0 292
ENSMUST00000126469 Eef1b2-007 processed_transcript Mus_musculus 0 292
ENSMUST00000126795 Eef1b2-003 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000148553 Eef1b2-005 processed_transcript Mus_musculus 0 239

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