C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392507 OSBPL7-201 ENSG00000006025 9606 - 17:47807373-47821834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyOvaryPlacentaTestisENST00000392507
Transcript ID Bladder Brain Colon Heart Kidney Ovary Placenta Testis
ENST00000392507 0.172±0.00 0.073±0.00 1.295±0.00 0.034±0.00 0.322±0.22 1.540±0.00 0.325±0.00 0.265±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0004DC CIL_0004DC_0002 CGP 17:47733244-47821834
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_0004DD CIL_0004DD_0002 CGP 17:47807372-47831534

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005776 IDA autophagic vacuole
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006869 IEA lipid transport
GO:0015485 IDA cholesterol binding
GO:0071397 IMP cellular response to cholesterol
GO:0097038 IDA perinuclear endoplasmic reticulum
GO:1901800 IMP positive regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090020 Osbpl7-001 protein_coding Mus_musculus 0 3070
ENSMUST00000168565 Osbpl7-201 protein_coding Mus_musculus 0 2798
ENSMUST00000143360 Osbpl7-003 retained_intron Mus_musculus 0 837
ENSMUST00000142399 Osbpl7-002 retained_intron Mus_musculus 0 268
ENSDART00000142841 osbpl3a-001 protein_coding Danio_rerio 9.99967e-42 176
ENSMUST00000154084 Osbpl7-005 processed_transcript Mus_musculus 7e-39 167
ENSMUST00000142406 Osbpl7-004 retained_intron Mus_musculus 7e-39 167
ENSDART00000125030 osbpl3a-201 protein_coding Danio_rerio 3e-37 161
ENSDART00000093412 osbpl6-201 protein_coding Danio_rerio 5e-16 92
ENSDART00000124777 osbpl6-001 protein_coding Danio_rerio 5e-16 92

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