C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase, Mg2+/Mn2+ dependent, 1D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392995 PPM1D-002 ENSG00000170836 9606 + 17:60600269-60664473 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392995
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392995 1.970±0.00 1.905±0.00 0.299±0.00 1.067±0.21 1.971±0.59 1.952±0.89 1.303±0.47 2.716±0.62 0.926±0.43 1.470±0.32 1.793±0.00 2.795±1.12 4.765±0.83 8.835±3.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000704 CIL_000704_0001 CGP 17:60443149-60666280
CIL_000569 CIL_000569_0002 CGP 17:60600183-61392838

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004722 IDA protein serine/threonine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0006470 TAS protein dephosphorylation
GO:0008285 TAS negative regulation of cell proliferation
GO:0009314 TAS response to radiation
GO:0035970 IDA peptidyl-threonine dephosphorylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020835 Ppm1d-001 protein_coding Mus_musculus 0 1565

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