C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393265 SLC24A4-003 ENSG00000140090 9606 + 14:92322581-92496251 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungENST00000393265
Transcript ID Colon Lung
ENST00000393265 0.118±0.00 0.105±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002N4 CIL_0002N4_0002 CGP 14:92121937-92501483
CIL_000539 CIL_000539_0001 CGP 14:92322581-92688994

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 ISS cytoplasm
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006813 IEA potassium ion transport
GO:0007608 ISS sensory perception of smell
GO:0015293 IEA symporter activity
GO:0016020 ISS membrane
GO:0016021 IEA integral component of membrane
GO:0050896 IEA response to stimulus
GO:0055085 TAS:IEA transmembrane transport
GO:0097186 ISS amelogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079020 Slc24a4-001 protein_coding Mus_musculus 0 2198
ENSMUST00000161325 Slc24a4-003 protein_coding Mus_musculus 0 1258
ENSMUST00000159329 Slc24a4-002 protein_coding Mus_musculus 0 1040
ENSMUST00000107158 Slc24a2-201 protein_coding Mus_musculus 4e-18 99
ENSMUST00000107155 Slc24a2-006 protein_coding Mus_musculus 4e-18 99
ENSMUST00000044990 Slc24a2-005 protein_coding Mus_musculus 4e-18 99
ENSMUST00000134643 Slc24a2-004 processed_transcript Mus_musculus 4e-18 99
ENSMUST00000134248 Slc24a2-003 processed_transcript Mus_musculus 4e-18 99
ENSMUST00000155361 Slc24a2-002 processed_transcript Mus_musculus 4e-18 99
ENSMUST00000107157 Slc24a2-001 protein_coding Mus_musculus 4e-18 99
ENSMUST00000037798 Slc24a1-201 protein_coding Mus_musculus 0.000000000000002 90

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