C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth associated protein 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393780 GAP43-002 ENSG00000172020 9606 + 3:115623510-115721490 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastPlacentaTestisENST00000393780
Transcript ID Breast Placenta Testis
ENST00000393780 0.389±0.00 0.658±0.00 0.056±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L7 CIL_0000L7_0002 CGP 3:115623324-117139389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007205 TAS protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0007399 IEA nervous system development
GO:0007411 IEA axon guidance
GO:0009611 TAS response to wounding
GO:0010001 IEA glial cell differentiation
GO:0014069 IEA postsynaptic density
GO:0016198 IEA axon choice point recognition
GO:0030054 IEA cell junction
GO:0030424 IEA axon
GO:0031527 IDA filopodium membrane
GO:0040008 IEA regulation of growth
GO:0042246 IEA tissue regeneration
GO:0045165 IEA cell fate commitment
GO:0045202 IEA synapse
GO:0051489 IDA regulation of filopodium assembly
GO:0071944 IEA cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102817 Gap43-001 protein_coding Mus_musculus 0 1096
ENSMUST00000125187 Gap43-002 processed_transcript Mus_musculus 0 756

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