C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing TCP1, subunit 4 (delta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394440 CCT4-001 ENSG00000115484 9606 - 2:61868089-61888804 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394440
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394440 37.409±0.00 20.147±0.00 1.251±0.00 20.129±0.00 22.719±0.00 19.596±17.08 11.207±0.00 20.048±0.00 8.146±0.00 10.600±7.90 21.234±0.00 41.650±16.35 25.230±6.01 31.814±15.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RH CIL_0000RH_0002 CGP 2:61824854-61888804

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173867 Cct4-001 protein_coding Mus_musculus 0 2327
ENSMUST00000020562 Cct4-004 protein_coding Mus_musculus 0 1820
ENSMUST00000174244 Cct4-003 retained_intron Mus_musculus 0 1267
ENSMUST00000174047 Cct4-008 nonsense_mediated_decay Mus_musculus 0 383
ENSMUST00000174689 Cct4-009 retained_intron Mus_musculus 0 377
ENSMUST00000174659 Cct4-006 nonsense_mediated_decay Mus_musculus 0 292
ENSMUST00000173853 Cct4-005 nonsense_mediated_decay Mus_musculus 0 228
ENSMUST00000145912 Cct4-002 processed_transcript Mus_musculus 0 226
ENSMUST00000117570 Gm15495-001 processed_pseudogene Mus_musculus 0 213

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