C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 16 open reading frame 87
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394806 C16orf87-002 ENSG00000155330 9606 - 16:46796607-46831162 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000394806
Transcript ID Adipose Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000394806 0.156±0.00 0.352±0.00 0.232±0.05 0.519±0.17 0.419±0.13 0.348±0.03 0.261±0.02 0.332±0.02 0.938±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044Z CIL_00044Z_0002 CGP 16:46706979-46831411
CIL_00044Y CIL_00044Y_0002 CGP 16:46796607-46931297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047749 4921524J17Rik-201 protein_coding Mus_musculus 0 702
ENSMUST00000030474 Nsun4-002 nonsense_mediated_decay Mus_musculus 0.0004 53

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