C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POC1 centriolar protein A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394970 POC1A-002 ENSG00000164087 9606 - 3:52075286-52154690 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000394970
Transcript ID Adipose Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000394970 0.209±0.00 0.136±0.00 0.159±0.02 0.070±0.00 0.576±0.00 0.183±0.00 0.618±0.14 1.338±0.27 1.427±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0001 VISTA 3:51705330-52307529
CIL_0008NT CIL_0008NT_0001 VISTA 3:51738719-52342071

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005515 IPI:IEA protein binding
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0030030 IEA cell projection organization
GO:0036064 IDA ciliary basal body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000191434 Poc1a-005 protein_coding Mus_musculus 0 1445
ENSMUST00000072206 Poc1a-002 protein_coding Mus_musculus 0 1319
ENSMUST00000188660 Poc1a-001 processed_transcript Mus_musculus 0 326
ENSMUST00000186366 Poc1a-003 processed_transcript Mus_musculus 4.06377e-44 183
ENSMUST00000189325 Poc1a-004 processed_transcript Mus_musculus 4.06377e-44 183

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