C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secreted phosphoprotein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395080 SPP1-001 ENSG00000118785 9606 + 4:87975688-87983297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395080
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395080 3.217±0.00 3.448±0.00 85.926±0.00 103.283±73.58 13.888±0.79 13.625±12.80 3.922±0.00 1114.666±1114.53 3.612±3.29 3.082±2.38 0.318±0.00 15.506±12.50 492.247±290.35 3.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BJ CIL_0000BJ_0001 CGP 4:87821411-87983426
CIL_0000BK CIL_0000BK_0001 CGP 4:87975650-88077777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0001649 IEA osteoblast differentiation
GO:0005125 IEA cytokine activity
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0005737 IEA cytoplasm
GO:0006954 IEA inflammatory response
GO:0007155 IEA cell adhesion
GO:0007566 TAS embryo implantation
GO:0010033 IEA response to organic substance
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0022617 TAS extracellular matrix disassembly
GO:0030154 IEA cell differentiation
GO:0030198 TAS extracellular matrix organization
GO:0030593 IEA neutrophil chemotaxis
GO:0031214 IEA biomineral tissue development
GO:0031988 IEA membrane-bounded vesicle
GO:0033280 IDA response to vitamin D
GO:0042995 IEA cell projection
GO:0045177 IEA apical part of cell
GO:0045780 IEA positive regulation of bone resorption
GO:0046697 TAS decidualization
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048545 IEA response to steroid hormone
GO:0048685 IEA negative regulation of collateral sprouting of intact axon in response to injury
GO:0050840 IEA extracellular matrix binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086833 Spp1-002 protein_coding Mus_musculus 0 255
ENSMUST00000145084 Spp1-006 protein_coding Mus_musculus 0 252
ENSMUST00000112746 Spp1-005 protein_coding Mus_musculus 0 252
ENSMUST00000031243 Spp1-001 protein_coding Mus_musculus 0 243
ENSMUST00000112747 Spp1-004 protein_coding Mus_musculus 0 237
ENSMUST00000112748 Spp1-003 protein_coding Mus_musculus 0 237

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