C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 41 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395969 VPS41-002 ENSG00000006715 9606 - 7:38725555-38909174 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395969
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395969 4.571±0.00 3.537±0.00 10.427±0.12 3.894±1.15 3.533±0.00 2.327±1.37 4.130±3.12 3.389±0.54 3.037±0.21 0.524±0.36 3.883±1.16 5.015±2.29 4.756±1.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005765 IDA lysosomal membrane
GO:0005798 IMP Golgi-associated vesicle
GO:0005829 IDA cytosol
GO:0006886 IEA intracellular protein transport
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030897 IDA HOPS complex
GO:0048193 IMP Golgi vesicle transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072961 Vps41-201 protein_coding Mus_musculus 0 2985

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