C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 1C, calmodulin-dependent 70kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396182 PDE1C-007 ENSG00000154678 9606 - 7:31790200-32070862 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverLungMuscleOvaryTestisENST00000396182
Transcript ID Bladder Brain Heart Liver Lung Muscle Ovary Testis
ENST00000396182 1.041±0.00 3.255±0.00 12.455±0.00 4.810±0.00 2.010±0.00 0.019±0.00 0.790±0.00 2.352±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000358 CIL_000358_0001 CGP 7:31686715-32299329
CIL_000359 CIL_000359_0001 CGP 7:31751179-32495283

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004117 TAS calmodulin-dependent cyclic-nucleotide phosphodiesterase activity
GO:0005516 IEA calmodulin binding
GO:0005829 TAS cytosol
GO:0007165 TAS:IEA signal transduction
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007202 TAS activation of phospholipase C activity
GO:0008152 IEA metabolic process
GO:0008543 TAS fibroblast growth factor receptor signaling pathway
GO:0045087 TAS innate immune response
GO:0046872 IEA metal ion binding
GO:0048011 TAS neurotrophin TRK receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166102 Pde1c-205 protein_coding Mus_musculus 0 2335
ENSMUST00000164752 Pde1c-204 protein_coding Mus_musculus 0 2335
ENSMUST00000114327 Pde1c-202 protein_coding Mus_musculus 0 2309
ENSMUST00000044505 Pde1c-201 protein_coding Mus_musculus 0 2309
ENSMUST00000168944 Pde1c-207 protein_coding Mus_musculus 0 2307
ENSMUST00000166890 Pde1c-206 protein_coding Mus_musculus 0 2161
ENSMUST00000164037 Pde1c-203 protein_coding Mus_musculus 0 2115
ENSMUST00000170774 Pde1c-208 protein_coding Mus_musculus 0 2089
ENSDART00000067655 PDE1C (1 of 2)-201 protein_coding Danio_rerio 0 632

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