C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centriolar coiled coil protein 110kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396212 CCP110-001 ENSG00000103540 9606 + 16:19523811-19553408 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverLungOvaryTestisENST00000396212
Transcript ID Brain Breast Colon Kidney Liver Lung Ovary Testis
ENST00000396212 1.185±0.43 0.414±0.00 0.722±0.00 0.314±0.00 0.194±0.08 2.150±1.36 0.934±0.67 3.914±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MZ CIL_0006MZ_0001 CGP 16:19501689-19553408
CIL_0006MW CIL_0006MW_0001 CGP 16:19523811-19706793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0005829 TAS cytosol
GO:0007099 IMP centriole replication
GO:0030030 IEA cell projection organization
GO:0032465 IMP regulation of cytokinesis
GO:0043234 IDA protein complex
GO:0051298 IMP centrosome duplication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106557 Ccp110-001 protein_coding Mus_musculus 0 2316
ENSMUST00000038650 Ccp110-201 protein_coding Mus_musculus 0 2071
ENSMUST00000123178 Ccp110-002 retained_intron Mus_musculus 0 1676
ENSMUST00000149056 Ccp110-003 retained_intron Mus_musculus 0 769
ENSMUST00000140831 Ccp110-004 retained_intron Mus_musculus 0 268
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.0001 55

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