C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-acetylgalactosaminidase, alpha-
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396398 NAGA-002 ENSG00000198951 9606 - 22:42058354-42070830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396398
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396398 7.928±0.00 7.288±0.00 1.081±0.00 1.617±0.02 4.547±0.32 3.545±1.03 2.284±1.28 5.992±1.83 4.744±0.41 4.433±0.45 1.371±1.00 5.583±2.97 18.328±6.02 4.985±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B9 CIL_0004B9_0001 CGP 22:41976272-42058456
CIL_0004BA CIL_0004BA_0001 CGP 22:41998725-42070842
CIL_0004BB CIL_0004BB_0001 CGP 22:42058354-42079441

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004557 IBA alpha-galactosidase activity
GO:0005737 IBA cytoplasm
GO:0005764 IEA lysosome
GO:0005975 IEA carbohydrate metabolic process
GO:0008456 IDA alpha-N-acetylgalactosaminidase activity
GO:0009311 IBA oligosaccharide metabolic process
GO:0016052 IDA carbohydrate catabolic process
GO:0016139 IBA glycoside catabolic process
GO:0019377 IMP glycolipid catabolic process
GO:0042803 IPI protein homodimerization activity
GO:0046477 IBA glycosylceramide catabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023088 Naga-201 protein_coding Mus_musculus 0 1203

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